HMMER3/f [3.1b1 | May 2013] NAME Brevinin_msa LENG 33 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Tue Dec 10 17:19:51 2013 NSEQ 179 EFFN 57.557175 CKSUM 417571341 STATS LOCAL MSV -7.0966 0.71975 STATS LOCAL VITERBI -7.1022 0.71975 STATS LOCAL FORWARD -3.6801 0.71975 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.41486 2.71891 3.73811 3.92072 2.93942 2.38531 4.67887 2.71186 2.15785 2.02979 4.30657 3.37233 3.59012 3.56962 3.87381 2.57955 2.93624 2.71649 5.48197 4.60686 2.69935 4.43542 2.78648 2.74440 3.40063 2.41069 3.73812 3.30269 2.65995 2.66764 4.17450 2.91420 2.75057 3.19463 2.91118 2.36527 2.77136 2.99835 4.59794 3.62820 1.35524 0.95216 1.03224 2.01390 0.14326 0.00000 * 1 3.25101 5.74183 6.34677 5.73978 1.11041 1.44797 5.89692 3.35307 5.52580 2.83527 4.87191 5.71124 5.90221 5.65610 5.53263 2.23589 4.60208 1.94491 6.38922 5.21272 11 f - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.03086 6.96274 3.52546 0.61958 0.77255 2.57023 0.07960 2 5.81116 6.97121 7.92043 7.41627 0.59339 7.42832 7.95826 2.35652 7.35019 1.76316 5.35895 7.61048 7.46762 7.30756 7.35973 6.87491 4.06474 1.90939 7.92324 6.90569 12 F - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00135 7.00724 7.72959 0.61958 0.77255 3.00054 0.05104 3 4.42209 5.82417 6.21167 5.59439 4.14626 5.56820 5.87928 3.81997 1.94473 0.45180 3.18602 5.66414 5.92711 5.55462 4.03785 3.20545 3.82079 4.06200 6.43483 5.26126 13 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00135 7.00724 7.72959 0.61958 0.77255 2.02306 0.14185 4 3.66468 6.94553 1.58742 5.88305 7.79655 0.39192 7.35797 7.35843 6.76711 6.99266 7.74867 6.02193 6.43650 6.68129 7.08724 2.78709 4.11369 6.37113 9.10592 7.93523 14 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00127 7.06877 7.79112 0.61958 0.77255 1.40707 0.28085 5 2.72740 6.35295 6.19884 5.68423 5.77721 2.59185 6.37729 5.13091 2.92292 3.29197 5.76756 5.81636 6.15462 5.83403 5.81526 2.15303 0.75816 1.90343 7.25206 6.06188 15 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00114 7.17498 7.89732 0.61958 0.77255 2.03744 0.13968 6 6.40226 7.48837 8.50391 7.99525 1.94459 8.14744 8.58674 0.89222 7.97165 1.04768 5.40657 8.34978 7.91673 7.66608 7.87039 7.67856 6.60757 2.47467 8.17945 7.32191 16 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.35720 7.19814 1.20525 0.61958 0.77255 2.63750 0.07423 7 4.85384 6.47172 6.11854 5.31079 5.65447 3.61972 5.79355 2.94534 0.38950 3.69693 5.61227 5.53570 6.09978 5.08956 4.39638 5.10101 3.72144 4.77896 2.07647 5.80685 17 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00159 6.84254 7.56488 0.61958 0.77255 3.27085 0.03871 8 2.72742 6.82426 1.68616 2.01634 6.16381 2.19291 5.22044 5.65958 3.07120 5.12824 5.87446 1.39425 5.40498 4.32620 4.50876 3.52165 2.10314 5.21352 7.25576 5.82513 18 n - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00159 6.84254 7.56488 0.61958 0.77255 3.27085 0.03871 9 1.39490 5.59322 6.19549 5.58050 2.12080 2.49134 5.72848 4.01099 5.36355 1.56274 2.90142 5.55839 5.75413 5.49180 5.36790 4.70286 2.29728 2.15885 6.21749 5.04274 19 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00159 6.84254 7.56488 0.61958 0.77255 0.67912 0.70737 10 1.61634 5.90914 6.50992 5.89395 1.49086 1.69079 6.04088 2.04203 5.67657 2.03342 3.54507 4.32752 6.07000 4.13574 5.68110 5.01843 4.76819 3.40098 6.53127 5.35572 20 f - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01230 7.21751 4.46623 0.61958 0.77255 2.24102 0.11244 11 4.09118 5.95516 4.82067 5.89139 3.02505 5.74438 6.07676 1.56517 1.05925 1.32572 3.90960 4.17409 6.10658 5.82249 5.70575 5.05472 4.80861 3.50493 6.57913 5.40337 21 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.06853 7.23940 2.72542 0.61958 0.77255 2.63639 0.07431 12 4.03860 6.90228 4.66691 4.11299 6.24052 1.38616 2.84380 5.72062 3.67682 5.20552 5.94688 1.92324 1.38315 3.35241 4.60680 2.57741 2.97059 4.46705 7.34146 3.59477 22 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01108 7.27494 4.57331 0.61958 0.77255 2.81940 0.06149 13 1.00733 5.95132 6.55709 5.94097 2.35482 3.98699 6.08505 2.07990 5.72277 2.73743 3.44492 5.91739 6.11367 5.85136 5.72600 2.20915 2.96778 2.21287 6.57458 5.39890 23 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.04701 7.26491 3.09611 0.61958 0.77255 2.47731 0.08770 14 1.54827 6.03119 6.63735 6.02462 2.31914 1.70928 6.18155 2.44177 2.40536 1.83178 5.14638 6.00695 6.20240 5.94139 5.81757 5.15500 4.89532 2.05633 6.67022 5.49439 24 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00552 7.29742 5.33397 0.61958 0.77255 2.54670 0.08158 15 1.64743 6.71006 3.85790 4.00676 4.87548 5.28328 4.52866 4.26528 0.70128 2.13075 5.77668 4.11276 5.67367 4.62363 3.58828 4.48363 4.22256 3.69834 7.20285 5.85684 25 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00100 7.30621 8.02855 0.61958 0.77255 1.58085 0.23042 16 4.48961 6.99970 4.73827 3.85318 6.34539 1.33351 3.78230 5.83100 2.41617 4.46741 6.04049 2.08660 2.06788 4.54557 3.10654 1.58180 3.36117 4.23245 7.43171 6.02148 26 g - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00094 7.36538 8.08773 0.61958 0.77255 2.75240 0.06590 17 1.55724 6.46820 7.15915 6.57013 2.54562 4.61670 6.78926 2.61514 6.37918 2.25020 3.79048 6.57416 6.73602 6.51425 6.39833 5.73605 5.38024 0.74086 7.24117 6.06832 27 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00373 7.40570 5.76994 0.61958 0.77255 1.66009 0.21087 18 0.80626 6.14472 6.75093 6.13961 3.63507 1.74376 6.28942 2.56797 5.92315 2.27140 5.26922 6.11194 2.54799 6.05208 5.92759 5.24890 3.54735 3.41488 6.78041 5.60508 28 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00087 7.44123 8.16357 0.61958 0.77255 2.44126 0.09107 19 1.61751 4.36672 6.50470 5.90166 4.46594 1.94617 6.20174 2.29021 2.68277 2.05923 5.25584 5.97613 3.50450 1.88587 5.80196 4.22773 3.15517 2.57087 6.75670 5.57588 29 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00087 7.44511 8.16746 0.61958 0.77255 2.61283 0.07615 20 2.93758 7.06672 4.80398 2.55297 6.41207 3.18238 4.59693 2.52940 1.98139 3.73816 4.73340 2.70347 3.58372 3.15130 4.38097 0.97847 3.74270 5.45751 7.49925 6.08813 30 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00087 7.44511 8.16746 0.61958 0.77255 2.61283 0.07615 21 3.24274 6.11470 6.72196 4.70896 2.81035 3.37097 6.24824 2.36389 5.88697 1.22439 2.48061 6.08129 6.27712 6.01515 5.88957 5.22574 4.45301 1.30837 6.73725 2.52897 31 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00507 7.44511 5.41037 0.61958 0.77255 2.61283 0.07615 22 3.39582 2.41734 6.76324 6.14849 4.12758 4.08175 6.29555 2.78019 5.93158 0.58459 2.57222 6.12617 6.31903 6.05916 5.93476 5.27161 3.82046 2.30281 6.78090 5.60639 32 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00088 7.43124 8.15358 0.61958 0.77255 0.06304 2.79536 23 4.73477 7.24916 2.28257 3.03076 6.59552 3.02065 3.45482 6.08262 2.77880 5.55498 6.28959 1.76778 1.77127 2.68440 3.82913 1.46121 3.92841 5.64051 7.68094 6.26884 33 s - - - 2.68635 4.42242 2.77537 2.73140 3.46371 2.40530 3.72512 3.29371 2.67758 2.69180 4.24707 2.90364 2.73757 3.18163 2.89818 2.37904 2.77467 2.98535 4.58494 3.61520 0.11233 3.49214 2.57942 0.06824 2.71859 0.61339 0.77982 24 2.74736 4.58794 5.02054 4.46349 6.25777 3.56019 3.13184 4.22226 1.32472 1.68022 4.70009 3.32552 5.88073 2.16645 4.93619 3.11309 1.93053 5.33741 7.46824 6.10780 35 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.02537 7.56002 3.70773 0.61958 0.77255 1.90128 0.16179 25 1.89672 6.28372 6.90499 6.29447 3.66480 6.10264 6.45076 2.28354 6.08075 1.01484 5.39832 4.88116 6.46361 6.21076 6.08658 1.63194 5.15249 2.07371 6.93532 5.75957 36 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00080 7.52589 8.24823 0.61958 0.77255 1.89617 0.16269 26 3.09578 6.21649 6.58156 5.97845 2.25789 5.95661 4.51761 2.74908 2.05680 1.38514 5.33420 6.05353 6.32228 3.90399 3.12584 1.68441 5.04175 2.84286 6.83500 2.74496 37 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00080 7.52974 8.25209 0.61958 0.77255 2.06848 0.13511 27 5.95873 0.04776 8.08571 8.16337 8.62429 4.53511 8.71166 8.34728 8.21693 7.94436 8.74002 3.65369 7.41920 8.27736 8.10143 6.18367 6.55881 7.34682 9.64032 8.93567 38 C - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00080 7.52974 8.25209 0.61958 0.77255 0.30242 1.34335 28 2.08218 7.18512 4.99931 4.44147 4.88530 3.68007 5.69411 5.98236 0.84685 2.74940 6.23212 4.98463 4.84109 1.66773 2.58848 3.78128 4.43301 4.95744 7.62807 6.23311 39 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00091 7.39957 8.12191 0.61958 0.77255 1.12004 0.39492 29 2.38801 6.34420 5.02095 6.40402 4.23491 6.23124 6.59661 0.94016 6.20275 1.29756 5.43103 6.39873 6.57448 6.33684 2.49406 5.55489 5.23777 2.20733 7.06425 5.88978 40 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00091 7.39957 8.12191 0.61958 0.77255 1.12004 0.39492 30 2.18040 6.87690 3.37645 3.92704 3.02601 3.96096 5.54192 5.60045 3.93549 3.35021 5.93806 4.84364 5.73645 4.66547 4.07997 0.98639 1.26995 5.23349 7.35343 5.98598 41 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00094 7.37036 8.09271 0.61958 0.77255 0.22822 1.58938 31 6.41626 8.38372 6.56597 4.66817 8.16457 1.07927 6.44466 7.30625 0.74534 6.53599 7.47473 2.31026 7.06428 5.57418 2.82290 6.33900 6.45862 7.02431 8.41354 7.42122 42 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00095 7.36039 8.08273 0.61958 0.77255 0.48576 0.95510 32 4.50723 7.02290 2.93982 2.82177 6.36903 2.07545 5.46445 5.85647 0.92942 5.32836 6.06389 3.24189 5.66966 2.61874 3.79603 3.09022 1.90623 5.41423 7.45414 6.04126 43 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00095 7.36039 8.08273 0.61958 0.77255 0.48576 0.95510 33 7.21141 0.03031 8.58816 8.67501 9.11725 3.65606 9.14713 9.21271 8.77050 8.52270 9.61139 8.50804 8.06405 8.97936 8.54505 7.47027 7.77538 8.44149 9.60529 9.39634 44 C - - - 2.68604 4.42378 2.77673 2.73277 3.46507 2.40666 3.72648 3.29507 2.67894 2.69508 4.22135 2.90278 2.73705 3.17358 2.89244 2.38040 2.77673 2.98672 4.58630 3.61656 0.17734 1.81706 * 0.88765 0.53038 0.00000 * //