HMMER3/f [3.1b1 | May 2013] NAME Cecropin_msa LENG 36 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Tue Dec 10 17:21:45 2013 NSEQ 47 EFFN 12.309387 CKSUM 4200269490 STATS LOCAL MSV -6.9273 0.71963 STATS LOCAL VITERBI -7.5624 0.71963 STATS LOCAL FORWARD -4.1741 0.71963 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.08324 5.63003 3.47339 2.91977 3.30119 2.50350 4.17186 2.35260 1.98419 2.72512 4.66225 3.25524 3.71587 3.08837 2.80757 3.18591 3.33076 2.52703 4.41569 4.91337 2.68683 4.42290 2.77585 2.73188 3.46419 2.40147 3.72560 3.29419 2.67806 2.69420 4.24755 2.90412 2.73805 3.18211 2.89723 2.37952 2.77585 2.98583 4.56756 3.61568 1.05635 1.27798 0.98436 0.68992 0.69638 0.00000 * 1 3.61316 5.57430 4.22870 3.59465 4.80304 4.44556 4.54439 2.86734 1.37379 1.48908 4.65768 4.03537 4.81283 3.73522 2.19074 1.98441 3.82161 3.89978 6.05173 4.81482 3 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00473 5.75156 6.47391 0.61958 0.77255 0.60017 0.79566 2 3.15985 6.34762 4.71045 3.11399 5.76100 4.88783 4.81058 5.10701 1.54921 3.27351 5.41575 4.39276 5.22890 3.94068 2.22015 4.20194 4.36665 4.78767 0.82840 5.45262 4 w - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00374 5.98635 6.70869 0.61958 0.77255 0.62265 0.76899 3 4.26784 6.72599 2.86407 3.63554 6.08126 4.71615 5.02519 5.55064 0.58697 2.01250 5.82590 2.18176 5.23566 4.16361 4.06219 4.18782 4.50769 5.14521 7.09387 5.71712 5 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00343 6.07301 6.79535 0.61958 0.77255 0.25024 1.50783 4 3.75251 5.11791 5.72331 5.11278 2.72521 4.93724 5.27894 2.00345 4.90228 1.42712 4.20064 5.10131 1.96287 5.03078 4.91159 2.11318 3.98549 1.75461 5.76059 4.58764 6 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.15104 6.15873 1.97999 0.61958 0.77255 0.48576 0.95510 5 5.46838 6.97129 6.69202 6.75192 0.40904 1.20769 6.39830 6.61499 6.88158 5.83797 7.12118 6.47508 6.49873 6.87826 6.75574 5.65046 5.98937 6.25448 6.59535 4.96845 7 F - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00365 6.01134 6.73369 0.61958 0.77255 1.28827 0.32262 6 5.11248 6.83212 5.94438 5.12115 6.25831 5.56451 5.54402 2.34836 0.21018 4.92431 6.06240 5.33817 5.97868 4.71436 3.79079 5.21321 5.28750 4.99367 7.18911 6.12849 8 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00365 6.01134 6.73369 0.61958 0.77255 1.28827 0.32262 7 4.27912 6.77249 2.28329 2.03918 6.17676 4.70857 4.97218 5.62607 0.52662 5.02754 5.84999 4.16119 5.21691 4.10297 2.84913 4.18538 4.50573 5.20594 7.08549 5.73129 9 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00365 6.01134 6.73369 0.61958 0.77255 0.18929 1.75760 8 4.99479 6.22179 6.86930 6.24263 4.82689 6.37684 6.67961 0.57525 2.06878 1.48788 4.57052 6.43023 6.50382 6.00346 5.58253 5.82394 5.21615 3.47490 6.99534 5.96287 10 I - - - 2.68550 4.42292 2.77587 2.73191 3.46421 2.40465 3.72562 3.29141 2.67808 2.69263 4.24757 2.90414 2.73807 3.18214 2.89868 2.37954 2.77298 2.98586 4.58544 3.61246 0.35890 1.20222 6.88108 0.54800 0.86300 0.48576 0.95510 9 4.54677 7.26638 2.30406 0.55150 6.54761 2.53526 5.32185 6.11102 2.00299 5.54614 6.39020 4.20037 3.68819 4.48249 5.00748 4.39742 4.83774 5.63411 7.68249 6.11674 13 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00315 6.15873 6.88108 0.61958 0.77255 0.48576 0.95510 10 5.19515 7.10964 6.13915 4.88356 6.89253 2.72173 3.54798 6.02483 0.52181 5.26059 6.18665 5.10150 5.88131 4.33304 1.40283 5.14727 5.21347 5.75012 7.13671 6.16542 14 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00315 6.15873 6.88108 0.61958 0.77255 0.48576 0.95510 11 1.74351 5.44708 6.11773 5.51838 2.33648 5.35969 5.71507 2.99874 5.32239 1.85108 2.39554 5.52874 5.66916 5.41887 5.32396 4.68835 4.35018 1.02418 6.12292 4.98109 15 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00315 6.15873 6.88108 0.61958 0.77255 0.48576 0.95510 12 4.24344 6.21701 4.28196 1.54633 5.70472 0.60417 5.60967 4.94511 4.62288 2.28164 5.64971 4.65188 5.47510 4.86317 5.03393 4.35269 4.62496 3.63364 7.15827 5.85659 16 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00315 6.15873 6.88108 0.61958 0.77255 0.48576 0.95510 13 4.73214 6.88182 5.27223 4.41161 6.50159 5.29349 2.34267 5.76531 2.00488 5.07379 5.94168 1.60392 5.60706 1.32976 1.47309 4.68662 4.84113 5.43213 7.01556 5.92059 17 q - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00315 6.15873 6.88108 0.61958 0.77255 0.48576 0.95510 14 2.44589 6.17069 4.05057 3.53847 5.64984 4.50756 2.14236 5.11399 3.41283 4.59176 5.35456 1.57868 4.94705 3.86946 1.59634 1.56445 4.03676 4.67322 6.70694 5.34558 18 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00315 6.15873 6.88108 0.61958 0.77255 0.48576 0.95510 15 1.51635 5.81504 6.73104 6.27891 5.33291 6.05059 6.92829 1.09404 6.20872 3.86549 5.09110 6.33091 6.38967 6.45933 6.34436 5.48614 2.03963 1.35339 7.32489 6.08871 19 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00315 6.15873 6.88108 0.61958 0.77255 0.48576 0.95510 16 5.16109 7.06704 6.13061 4.87501 2.30523 5.60560 2.52541 5.95367 1.36327 5.20885 6.14148 5.09498 5.87190 4.33825 0.70628 5.11956 5.18836 5.68508 7.00238 5.88672 20 r - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00315 6.15873 6.88108 0.61958 0.77255 0.48576 0.95510 17 4.91203 7.73939 0.88336 3.71954 7.00443 4.88783 5.56987 6.62633 1.29200 6.01709 6.97185 1.47953 5.60362 4.76229 5.39394 4.70237 5.23977 6.12344 8.13502 6.49118 21 d - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00315 6.15873 6.88108 0.61958 0.77255 0.48576 0.95510 18 0.85375 5.80826 5.64035 5.27980 2.31782 1.37311 6.02643 5.31359 4.99209 4.99362 5.84939 5.21558 5.44999 5.39924 2.01406 4.15023 4.43519 4.80602 7.16251 5.92283 22 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00351 6.05094 6.77328 0.61958 0.77255 0.48576 0.95510 19 1.91660 5.14612 5.74215 5.15145 4.30769 4.99334 5.38698 0.98835 4.96158 2.64938 4.29388 5.16103 5.35769 5.11251 4.99730 2.90144 2.10409 1.98231 5.88617 4.70413 23 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00351 6.05094 6.77328 0.61958 0.77255 0.48576 0.95510 20 3.13349 5.34000 4.32677 2.55299 4.50678 4.50847 4.77834 1.01988 3.76022 3.56104 4.45503 4.21699 4.90169 2.15887 4.13468 2.01045 3.80074 2.47138 5.94013 4.69389 24 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00351 6.05094 6.77328 0.61958 0.77255 0.48576 0.95510 21 3.56021 6.04695 3.81766 1.92705 5.40810 4.32077 4.47867 4.87991 1.22321 4.34344 5.08955 3.78919 4.71004 1.98767 2.73592 2.19190 3.78500 2.58010 6.45609 5.07103 25 k - - - 2.67976 4.42374 2.77668 2.73272 3.46503 2.40261 3.72643 3.29503 2.67890 2.69504 4.24839 2.90381 2.73175 3.18295 2.89950 2.38036 2.77668 2.98667 4.58626 3.61420 0.53161 0.88868 6.77328 1.11583 0.39696 0.48576 0.95510 22 0.71380 5.70325 6.31611 6.26176 6.46405 1.12473 6.70555 5.85774 6.12416 5.63612 6.40562 5.46369 5.40787 6.17828 6.07585 4.03089 2.65013 2.77397 7.84221 6.82593 30 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00351 6.05094 6.77328 0.61958 0.77255 0.48576 0.95510 23 4.82657 5.96090 7.02641 6.61065 5.24915 6.65515 7.63911 0.87863 6.63488 1.59097 4.90950 6.83198 6.74848 6.85799 6.82449 6.16534 5.08573 1.08560 7.64887 6.48078 31 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00351 6.05094 6.77328 0.61958 0.77255 0.48576 0.95510 24 0.81753 6.36361 3.80114 2.31113 6.01021 1.71813 5.11257 5.50972 4.01111 5.01612 5.80694 4.15453 2.22100 3.25783 4.53084 3.99170 4.33921 5.01214 7.16712 5.74163 32 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00351 6.05094 6.77328 0.61958 0.77255 0.48576 0.95510 25 4.54132 5.74089 6.68400 6.21162 2.47429 6.14739 6.85508 1.37484 6.14626 3.67910 4.93134 6.32324 6.38347 6.39099 6.28275 5.57060 2.21653 0.72400 7.19328 5.95627 33 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00351 6.05094 6.77328 0.61958 0.77255 0.48576 0.95510 26 0.87157 5.74099 6.64162 6.14914 5.02816 6.06346 6.71152 1.98675 6.06152 1.80585 4.79691 6.24883 6.30619 6.25511 6.16479 5.47313 4.77932 1.47509 7.03564 5.84952 34 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00351 6.05094 6.77328 0.61958 0.77255 0.48576 0.95510 27 2.01091 5.55151 4.08655 3.52977 4.77474 1.33466 4.64099 2.08113 2.33935 3.81223 4.66239 4.01276 4.80302 2.01943 3.88716 3.63352 3.77702 3.14725 6.11000 4.82127 35 g - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.16977 6.05094 1.87220 0.61958 0.77255 0.48576 0.95510 28 3.94448 6.44260 3.53217 2.53690 5.89581 2.05501 4.87813 5.40558 3.75350 4.87694 5.66834 3.92231 2.35397 0.71454 4.27816 3.02293 4.23001 4.93623 7.01069 5.55404 36 q - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00414 5.88531 6.60765 0.61958 0.77255 1.28827 0.32262 29 0.53841 5.36770 6.03724 5.50512 2.31045 5.25082 5.81072 2.57149 5.34695 3.26395 4.43478 5.50157 5.63916 5.49245 5.39745 4.62410 4.29179 2.13507 6.24624 5.03276 37 A - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.06902 5.88531 2.75020 0.61958 0.77255 1.28827 0.32262 30 1.46795 5.85137 3.56450 2.10815 5.19831 4.10696 4.29779 4.68111 1.55304 4.15497 4.89528 3.22477 4.50606 2.38260 3.50583 3.30895 2.26553 4.24381 6.28122 4.87468 38 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.06885 5.82070 2.75559 0.61958 0.77255 1.46361 0.26319 31 1.20789 5.78097 3.57295 3.04301 5.15814 4.08594 4.30607 4.63300 1.88855 4.12278 4.87165 1.82683 4.49820 3.09549 3.51202 2.56389 2.94404 4.20154 6.26010 4.86426 39 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00471 5.75655 6.47890 0.61958 0.77255 0.50415 0.92639 32 3.80462 5.16560 5.67016 5.06711 4.21006 5.00953 5.34921 1.55361 3.11870 1.03771 4.15867 5.12730 5.34407 2.67085 4.88424 4.32962 4.03689 1.71467 5.85021 4.68644 40 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.16852 5.94294 1.88084 0.61958 0.77255 1.08770 0.41097 33 1.18811 4.89200 5.11095 4.54146 4.01526 1.47673 4.94285 1.89281 4.38984 2.74687 4.04329 4.64588 4.94212 4.58291 4.50779 3.85099 3.69148 3.10396 5.54741 3.22433 41 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.04982 5.77903 3.08992 0.61958 0.77255 1.55742 0.23658 34 1.76708 5.80480 3.59178 3.04061 5.18109 1.90284 4.28228 4.65483 1.73007 4.12881 4.87545 2.23179 4.49486 3.38307 2.18677 2.91156 3.56738 4.22053 6.25093 4.86147 42 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.16575 5.73402 1.90043 0.61958 0.77255 1.64599 0.21421 35 3.30817 5.23188 4.62921 4.19550 5.16238 1.73946 5.19342 4.57240 4.18050 2.73019 5.08340 4.37885 1.30233 4.46683 4.51501 2.44256 1.45804 4.10767 6.52872 5.31446 43 p - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.13103 5.57393 2.12852 0.61958 0.77255 1.88688 0.16434 36 1.84184 5.50985 3.50567 2.93735 4.82212 2.71893 4.13535 4.26001 1.87542 2.70643 4.57935 3.46219 4.35099 3.25563 1.63050 3.16732 2.71411 3.88675 5.97156 4.61856 44 r - - - 2.68655 4.42262 2.77501 2.73160 3.46391 2.40425 3.72531 3.29391 2.67649 2.69392 4.24726 2.90383 2.73776 3.18183 2.89596 2.37924 2.77556 2.98555 4.58514 3.61540 0.51276 0.91340 * 0.38137 1.14862 0.00000 * //