HMMER3/f [3.1b1 | May 2013] NAME Maximin_msa LENG 25 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Tue Dec 10 17:35:11 2013 NSEQ 25 EFFN 24.404907 CKSUM 3332126576 STATS LOCAL MSV -6.3239 0.72014 STATS LOCAL VITERBI -6.5198 0.72014 STATS LOCAL FORWARD -4.0248 0.72014 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.27719 6.39757 3.73162 3.76438 3.41377 1.72843 5.00586 2.57028 2.19372 1.74314 4.03568 3.67944 4.07417 4.45019 4.25225 2.88426 3.15154 2.76936 6.88596 3.90057 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.57920 6.81115 0.82427 0.61958 0.77255 0.00000 * 1 4.22717 6.13165 6.19889 6.27594 7.03936 0.23788 7.05890 6.65429 6.49501 6.30928 7.04879 5.77229 5.77559 6.52188 6.47372 1.81966 4.82829 5.63042 8.26875 7.34458 1 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00292 6.23487 6.95721 0.61958 0.77255 0.44129 1.03059 2 6.78453 7.81271 7.84525 7.82612 7.23213 6.96484 8.38553 0.01649 7.92393 5.84834 7.26403 8.02015 7.55208 8.19835 7.80661 7.50531 7.14432 5.34847 8.63261 7.87941 2 I - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00194 6.64314 7.36548 0.61958 0.77255 1.78538 0.18360 3 6.19862 7.71937 7.49284 7.54263 7.35355 0.44342 8.13482 7.06206 7.66093 1.06340 7.51340 7.45473 7.20265 7.85069 7.55024 6.45915 6.74080 6.93715 8.60469 7.89257 3 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00194 6.64314 7.36548 0.61958 0.77255 1.78538 0.18360 4 2.19202 6.31601 6.94857 7.01626 7.32518 0.33072 7.43859 6.86223 6.91880 6.55546 7.25859 6.08848 6.00765 6.91505 6.80387 4.62255 1.96217 5.81231 8.65431 7.70461 4 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00194 6.64314 7.36548 0.61958 0.77255 1.78538 0.18360 5 1.60661 6.42426 6.15916 5.77310 6.81890 5.21782 6.50959 6.04718 1.11336 5.81565 6.66116 5.71569 1.12244 5.76144 5.23421 4.70506 5.02003 2.35095 8.01274 6.91641 5 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00194 6.64314 7.36548 0.61958 0.77255 0.11082 2.25472 6 5.34079 6.56314 7.40822 6.86428 2.97135 6.79790 7.24759 1.43989 6.73487 1.37261 5.12089 6.97257 6.96317 6.76910 1.92931 6.18604 5.57319 1.25505 7.43149 6.35713 6 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00164 6.81115 7.53350 0.61958 0.77255 0.48576 0.95510 7 5.87232 7.14712 7.95087 7.49444 5.26248 7.10712 7.85122 2.29624 7.37295 0.33330 4.98402 7.58588 7.27122 7.08848 7.23134 1.90637 6.15515 4.68199 7.63268 6.74218 7 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00164 6.81115 7.53350 0.61958 0.77255 0.48576 0.95510 8 4.66532 6.61178 5.98753 6.07862 7.52171 0.83587 7.30434 7.09208 6.71087 6.74684 7.48153 1.86566 6.19559 6.67699 6.87001 0.97093 5.25841 6.07466 8.83049 7.75403 8 g - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00164 6.81115 7.53350 0.61958 0.77255 0.48576 0.95510 9 1.81281 5.63611 5.74715 5.15763 4.74731 1.39479 5.61801 4.08129 1.72501 1.89976 3.12134 5.31951 5.66448 5.22321 5.15908 4.58249 2.93207 2.47503 6.26130 5.07405 9 g - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00164 6.81115 7.53350 0.61958 0.77255 0.48576 0.95510 10 5.39695 6.56315 7.59686 7.18202 6.03193 0.97896 8.12888 2.16680 7.18318 2.41235 5.70850 7.34223 7.32198 7.46659 7.37982 6.61327 5.66732 0.92185 8.31756 7.07936 10 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00164 6.81115 7.53350 0.61958 0.77255 0.48576 0.95510 11 5.22173 7.25705 5.96064 5.17675 1.91937 1.65147 5.81715 6.35411 0.72434 5.72234 6.59804 5.48189 6.23040 4.95428 3.04319 2.48245 5.43338 5.97638 7.66721 6.54701 11 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00164 6.81115 7.53350 0.61958 0.77255 0.48576 0.95510 12 2.03009 6.58041 2.48524 4.08584 6.14730 2.42746 5.37505 5.62312 4.15941 3.14093 5.89687 1.59382 5.46286 4.49425 4.64560 2.03323 1.43255 5.15884 7.29338 5.90896 12 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00164 6.81115 7.53350 0.61958 0.77255 0.48576 0.95510 13 0.66544 6.31586 7.03948 6.79639 1.45483 5.41379 7.03581 5.02384 6.60772 5.14770 6.15784 6.21316 6.19365 6.68411 6.56321 4.89049 2.18049 2.31914 7.70596 6.50108 13 A - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00164 6.81115 7.53350 0.61958 0.77255 0.48576 0.95510 14 6.45940 7.48429 8.43509 7.84719 2.43876 8.09500 8.10700 4.48894 7.78185 0.31453 1.86258 8.31219 7.60970 7.19170 7.49598 7.65201 6.59980 4.99256 7.59008 6.76146 14 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00164 6.81115 7.53350 0.61958 0.77255 0.48576 0.95510 15 5.28331 7.64236 2.40126 4.55200 7.41978 1.62717 6.22195 6.86414 0.66542 6.38503 7.29181 5.10206 6.20848 5.41142 5.55987 5.21262 5.65519 1.89497 8.49154 7.04884 15 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00164 6.81115 7.53350 0.61958 0.77255 0.48576 0.95510 16 6.58564 8.32086 1.40900 5.94321 8.41607 0.29810 7.62967 8.41489 7.05922 7.71175 8.81296 6.48385 7.20642 6.99247 7.54098 6.58499 7.03379 7.80194 9.04241 8.32480 16 G - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00164 6.81115 7.53350 0.61958 0.77255 0.48576 0.95510 17 1.30929 6.99265 7.84107 7.27616 5.19174 7.19979 7.59861 4.28448 7.15138 0.78807 1.87462 7.45321 7.21337 6.92759 7.04184 6.62707 6.01049 2.41259 7.48657 6.58303 17 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00164 6.81115 7.53350 0.61958 0.77255 0.48576 0.95510 18 1.35673 6.50307 7.31055 6.80813 5.41244 6.44851 7.17532 1.33438 6.66566 0.98510 5.19593 6.79746 6.79746 6.71683 6.67250 5.86334 2.82539 3.92583 7.43871 6.35855 18 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00164 6.81115 7.53350 0.61958 0.77255 0.48576 0.95510 19 5.65616 7.79882 5.31085 5.00542 7.52456 2.50251 5.92755 6.77705 0.39925 6.04698 6.97280 3.09757 6.38946 1.87222 4.29439 5.56668 5.80132 6.43579 7.96200 6.86865 19 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00164 6.81115 7.53350 0.61958 0.77255 0.48576 0.95510 20 1.93439 6.42016 4.34807 1.36746 5.71383 2.48291 5.05052 2.60231 2.20373 4.70489 5.48187 2.41412 5.24535 4.16998 4.29341 4.05108 4.29116 2.00014 6.89310 5.51873 20 e - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00164 6.81115 7.53350 0.61958 0.77255 0.48576 0.95510 21 6.40429 7.44582 8.38521 7.82486 5.19352 8.00017 8.18891 2.44053 7.76257 0.12462 4.88802 8.28012 7.60311 7.22403 7.50540 7.59677 6.56218 4.87668 7.66431 6.89085 21 L - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.33546 6.81115 1.25916 0.61958 0.77255 0.48576 0.95510 22 0.36440 6.13863 6.84817 6.89191 7.08602 4.94660 7.25773 6.51894 6.73088 6.29120 7.02310 5.92681 5.83866 6.74024 6.61599 1.49990 4.83161 3.05591 8.43998 7.46997 22 A - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.04754 6.47798 3.10348 0.61958 0.77255 2.25866 0.11036 23 2.80749 6.34792 2.69570 1.48912 2.50061 4.56128 4.78164 5.17804 1.58849 4.65284 5.39497 4.02749 4.97748 3.88321 4.03528 1.49016 4.06666 4.73790 6.78249 5.36462 23 e - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.25899 6.43283 1.48474 0.61958 0.77255 2.34730 0.10051 24 4.83179 6.84978 5.21967 4.63112 6.53618 5.31114 1.81393 5.94327 1.42070 5.28175 6.18417 4.95365 5.75348 4.46307 3.64785 4.83603 0.70819 5.57923 7.18960 6.07755 24 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00309 6.17693 6.89927 0.61958 0.77255 2.69421 0.06999 25 6.42282 7.18444 7.07774 7.13615 1.56101 6.73651 5.22451 5.83153 6.89189 2.66717 6.29863 6.19644 6.95818 6.40031 6.59490 6.16282 6.59323 5.85628 5.28389 0.37568 25 Y - - - 2.68291 4.42429 2.77724 2.73328 3.46558 2.40717 3.71841 3.29558 2.67945 2.68935 4.24894 2.89463 2.73944 3.17833 2.90005 2.38091 2.77724 2.98255 4.58681 3.61707 1.45695 0.26520 * 0.69209 0.69421 0.00000 * //