Moricin

Moricin is a antibacterial peptide that is highly basic. The structure of moricin reveals that it is comprised of a long alpha-helix. The N terminus of the helix is amphipathic, and the C terminus of the helix is predominately hydrophobic. The amphipathic N-terminal segment of the alpha- helix is mainly responsible for the increase in permeability of the bacterial membrane which kills the bacteria [PMID: 11997013].

The below sequences were used to create Moricin sequence signatures:

>CAMPSQ1090
AKIPIKAIKTVGKAVGKGLRAINIASTANDVFNFLKPKKRKH
>CAMPSQ147
GKIPVKAIKKGGQIIGKALRGINIASTAHDIISQFKPKKKKNH
>CAMPSQ1027
GKIPVKAIKKAGAAIGKGLRAINIASTAHDVYSFFKPKHKKK
>CAMPSQ1032
GKIPVKAIKQAGKVIGKGLRAINIAGTTHDVVSFFRPKKKKH
>CAMPSQ152
KGIGSALKKGGKIIKGGLGALGAIGTGQQVYEHVQNRQ
>CAMPSQ146
KVNVNAIKKGGKAIGKGFKVISAASTAHDVYEHIKNRRH
>CAMPSQ3990
MKFTGIFFIIMAIIALFIGSNEAAPKVNVNAIKKGGKAIGKGFKVISAASTAHDVYEHIK
NRRH
>CAMPSQ2910
KVNANAIKKGGKAIGKGFKVISAASTAHDVYEHIKNRRH
>CAMPSQ151
KVPVGAIKKGGKAIKTGLGVVGAAGTAHEVYSHIRNRH
>CAMPSQ149
KVPIGAIKKGGKIIKKGLGVLGAAGTAHEVYNHVRNRQ
>CAMPSQ148
KVPIGAIKKGGKIIKKGLGVIGAAGTAHEVYSHVKNRH
>CAMPSQ150
KVPIGAIKKGGKIIKKGLGVIGAAGTAHEVYSHVKNRQ

The below sequences were retrieved using Moricin sequence signatures:

> CAMPMorP, CAMPMorH | CAMPSQ147 | A5JSU6 | 146737992
GKIPVKAIKKGGQIIGKALRGINIASTAHDIISQFKPKKKKNH
> CAMPMorP, CAMPMorH | CAMPSQ148 | A5JSU7 | 146737994
KVPIGAIKKGGKIIKKGLGVIGAAGTAHEVYSHVKNRH
> CAMPMorP, CAMPMorH | CAMPSQ149 | A5JSU8 | 146737996
KVPIGAIKKGGKIIKKGLGVLGAAGTAHEVYNHVRNRQ
> CAMPMorP, CAMPMorH | CAMPSQ150 | A5JSU9 | 146737998
KVPIGAIKKGGKIIKKGLGVIGAAGTAHEVYSHVKNRQ
> CAMPMorP, CAMPMorH | CAMPSQ151 | A5JSV0, A5JSV1 | 146738000, 146738002
KVPVGAIKKGGKAIKTGLGVVGAAGTAHEVYSHIRNRH
> CAMPMorP, CAMPMorH | CAMPSQ152 | A5JSV2 | 146738004
KGIGSALKKGGKIIKGGLGALGAIGTGQQVYEHVQNRQ
> CAMPMorP, CAMPMorH | CAMPSQ1027 | Q7YZB4 | 159163502
GKIPVKAIKKAGAAIGKGLRAINIASTAHDVYSFFKPKHKKK
> CAMPMorP, CAMPMorH | CAMPSQ1032 | Q86MA1 | 170784960
GKIPVKAIKQAGKVIGKGLRAINIAGTTHDVVSFFRPKKKKH
> CAMPMorP, CAMPMorH | CAMPSQ1090 | P82818, O96059 | 20138941, 1246017
AKIPIKAIKTVGKAVGKGLRAINIASTANDVFNFLKPKKRKH
> CAMPMorH | CAMPSQ1252 | P83416 | 25091528
GKIPIGAIKKAGKAIGKGLRAVNIASTAHDVYTFFKPKKRH
> CAMPMorP, CAMPMorH | CAMPSQ1454 | Q6IZA1 | 47834350
GKIPVKAIKKAGTAIGKGLRAINIASTAHDVYSFFKPKHKKKH
> CAMPMorP, CAMPMorH | CAMPSQ1460 | Q5MAE8 | 56681295
AMSLVSCSTAAPAKIPIKAIKTVGKAVGKGLRAINIASTANDVFNFLKPKKRKH
> CAMPMorP, CAMPMorH | CAMPSQ1472 | Q19ML1 | 100170633
AKIPIKAIKTVGKAVGKGLRAINIASTANDVFNFLEPKKRKH
> CAMPMorP, CAMPMorH | CAMPSQ1657 | P82818 | 21465926
AKIPIKAIKTVGKAVGKGLRAINIASTANDVFNFLKPKKRKA
2015, © Biomedical Informatics Centre, NIRRH, Mumbai