Palustrin

Palustrins are antimicrobial peptides obtianed from the skin secretions of frogs [PMID: 21911019, 11087945].

The below sequences were used to create Palustrin sequence signatures:

>CAMPSQ3142
GIFPKIIGKGIVNGIKSLAKGVGMKVFKAGLNNIGNTGCNNRDEC
>CAMPSQ521
GIFPKIIGKGIKTGIVNGIKSLVKGVGMKVFKAGLSNIGNTGCNEDEC
>CAMPSQ531
GIFPKIIGKGIKTGIVNGIKSLVKGVGMKVFKAGLNNIGNTGCNEDEC
>CAMPSQ524
ALFSILRGLKKLGKMGQAFVNCEIYKKC
>CAMPSQ525
ALFSILRGLKKLGNMGQAFVNCKIYKKC
>CAMPSQ526
ALSILRGLEKLAKMGIALTNCKATKKC
>CAMPSQ527
ALSILKGLEKLAKMGIALTNCKATKKC
>CAMPSQ528
GFLSTVKNLATNVAGTVLDTIRCKVTGGCRP
>CAMPSQ529
GFFSTVKNLATNVAGTVIDTLKCKVTGGCRS
>CAMPSQ530
GFLSTVKNLATNVAGTVIDTLKCKVTGGCRS
>CAMPSQ2920
GFISTVKNLATNVAGTVIDTIKCKVTGGC
>CAMPSQ3499
GFMDTAKNVAKNVAVTLIDKLRCKVTGGC
>CAMPSQ3501
GFMDTAKNVAKNVAATLLDKLKCKITGGC
>CAMPSQ3622
GLWDSIKNFGKTIALNVMDKIKCKIGGGCPP
>CAMPSQ3718
GLWNTIKEAGKKFAINVLDKIRCGIAGGCKT
>CAMPSQ2693
LWNSIKIAGKKLFVNVLDKIRCKVAGGCKTSPDVE
>CAMPSQ3508
GLWNSIKIAGKKLFVNVLDKIRCKVAGGCKTSPDVE

The below sequences were retrieved using Palustrin sequence signatures:

> CAMPPalH | CAMPSQ521 | P84262 | 55976267
GIFPKIIGKGIKTGIVNGIKSLVKGVGMKVFKAGLSNIGNTGCNEDEC
> CAMPPalH | CAMPSQ531 | P84281 | 55976286
GIFPKIIGKGIKTGIVNGIKSLVKGVGMKVFKAGLNNIGNTGCNEDEC
> CAMPPalH | CAMPSQ1756 | Q1JS88 | 119390856
GIFPKIIGKGIKTGIVNGIKSLVKGVGMKVFKAGLSNIGNTGCNEDEC
2015, © Biomedical Informatics Centre, NIRRH, Mumbai