Abaecin

Abaecin represents antimicrobial peptides produced by bees. These peptides have strong antimicrobial and some anti-fungal activity and has homology to abaecin which is the largest proline-rich antimicrobial peptide isolated from European bumblebee Bombus pascuorum [PMID: 9219367].

The below sequences were used to create Abaecin sequence signatures:

>CAMPSQ923
ELPKLPDDKVLIRSRSNCPKGKVWNGFDCKSPFAFS
>CAMPSQ3775
YVPKIPKPQPNKPNFPSFPGHGPFNPHASRFPRSPKDNGKIVFDAKKEGGKTQWNVETQQ
KVWGNKHGSIHVSAGAGKQPGGKPQGQVGIGGSFSWGK
>CAMPSQ186
YVPLPNVPQPGRRPFPTFPGQGPFNPKIKWPQGY
>CAMPSQ381
FVPYNPPRPGQSKPFPSFPGHGPFNPKIQWPYPLPNPGH
>CAMPSQ3114
FVPYNPPRPYQSKPFPSFPGHGPFNPKIQWPYPLPNPGH

The below sequences were retrieved using Abaecin sequence signatures:

> CAMPAbaH | CAMPSQ186 | P15450 | 1703044
YVPLPNVPQPGRRPFPTFPGQGPFNPKIKWPQGY
> CAMPAbaH | CAMPSQ381 | P81463 | 3912960
FVPYNPPRPGQSKPFPSFPGHGPFNPKIQWPYPLPNPGH
> CAMPAbaH | CAMPSQ923 | Q86SC0 | 74813990
ELPKLPDDKVLIRSRSNCPKGKVWNGFDCKSPFAFS
> CAMPAbaH | CAMPSQ2647 | I2E7P4 | 387763768
QPPIRNPPPGGWKPFPTFPGQGPYNPKIRFPH
> CAMPAbaH | CAMPSQ2649 | | 380030794
VPLPNIPQPASRPLPTFYGQGPFNPKNKWP
> CAMPAbaH | CAMPSQ2661 | | 350417686
PPRPGQSKPFPSFPGHGPFNPKIQWPYPLPNPGH
> CAMPAbaH | CAMPSQ2663 | | 340712303
VPYNPPRPGQSKPFPTFPGHGPFNPKTQWPYPLPNPGH
> CAMPAbaH | CAMPSQ3114 | P81463 |
FVPYNPPRPYQSKPFPSFPGHGPFNPKIQWPYPLPNPGH
> CAMPAbaP | CAMPSQ3775 | F8UWJ4 | 336455319
YVPKIPKPQPNKPNFPSFPGHGPFNPHASRFPRSPKDNGKIVFDAKKEGGKTQWNVETQQ
KVWGNKHGSIHVSAGAGKQPGGKPQGQVGIGGSFSWGK
> CAMPAbaH | CAMPSQ5305 | B9UK29 | 199588942
MKVVIFIFALLATICAAFAYVPLPNIPPGRRPFPTFPGQGPFNPKIKWPQGY
> CAMPAbaH | CAMPSQ5306 | B9UK30 | 199588944
MKVVIFIFALLATICAAFAYVPLPNIPQPGRRPFPTFPGQGPFNPKIKWPQGY
> CAMPAbaH | CAMPSQ5307 | B9UK34 | 199588952
MKVVIFIFALLATVCAAFAYVPLPNIPPGRRPFPTFPGQGPFNPKIKWPQGY
> CAMPAbaH | CAMPSQ5308 | B9UK35 | 199588954
MKVVIFIFALLATICAAFAYVPLPNIPQPGRRPFPTFPGQGPFNPKIRWPQGY
> CAMPAbaH | CAMPSQ5309 | B9UK38 | 199588960
MKVVIFIFALLATVCAAFAYVPLPNIPQPGRRPFPTFPGQGPFNPKIKWPQGY
> CAMPAbaH | CAMPSQ5563 | C7AHU0 | 254548047
MKFYLFIFTLLLAAMAVLAYQPPVKPPPPGGWKPFPTFPGQGPYNPKIRFLH
> CAMPAbaH | CAMPSQ5564 | C7AHU1 | 254548049
MKFYLFIFTLLLAAMAVLAYQPPVKPPPPGGWKPFPTFPGQGPYNPKIRLPH
> CAMPAbaH | CAMPSQ5565 | C7AHU2 | 254548051
MKFYLFIFTLLLAAMAVLAYQPPVKPPPPGGWKPFPTFPGQGPYNPKIRLPH
> CAMPAbaH | CAMPSQ5566 | C7AHU3 | 254548053
MKFYLFIFTLLLAAMAVLAYQPPVKPPPPGGWKPFPTFPGQGPYNPKIRFLH
> CAMPAbaH | CAMPSQ5567 | C7AHU4 | 254548055
MKFYLFIFTLLLAAMAVLAYQPPVKPPPPGGWKPFPTFPGQGPYNPKIRFLH
> CAMPAbaH | CAMPSQ5568 | C7AHU5 | 254548057
MKFYLFIFTLLLAAMAVLAYQPPVKPPPPGGWKPFPTFPGQGPYNPKIRLPH
> CAMPAbaH | CAMPSQ5569 | C7AHU6 | 254548059
MKFYLFIFTLLLAAMAVLAYQPPVKPPPPGGWKPFPTFPGQGPYNPKIRLPH
> CAMPAbaH | CAMPSQ5570 | C7AHU7 | 254548061
MKFHLFIFTLLLAAMAVLAYRPPVKPPPPGGWKPFPTFPGQGPYNPKIRFPH
> CAMPAbaH | CAMPSQ5571 | C7AHU8 | 254548063
MKFYLFIFTLLLAAMAVLAYQPPVKPPPPGGWKPFPTFPGQGPYNPKIRLPH
> CAMPAbaH | CAMPSQ5572 | C7AHU9 | 254548065
MKFYLFIFTLLLAAMAVLAYQPPVKPPPPGGWKPFPTFPGQGPYNPKIRFLH
> CAMPAbaH | CAMPSQ5573 | C7AHV0 | 254548067
MKFYLFIFTLLLAAMAVLAYQPPVKPPPPGGWKPFPTFPGQGPYNPKIRLPH
> CAMPAbaH | CAMPSQ5635 | D2XR04 | 283777646
WILAFVPYNPPRPGQSKPFPTFPGHGPFNPKTQWPYPLPNPGH
> CAMPAbaH | CAMPSQ5638 | D2YZ39 | 281181738
MKVVIFIFALLATICAAFVYVPLPNIPQPGRRPFPTFPGQGPFNPKIKWPQGY
> CAMPAbaH | CAMPSQ5830 | F4WAL0 | 332028737
MKFHLFIFTLLLAVMTVFAYQSPVRKPPAGGWKPFPTFPGQGPYNPKIRFPH
> CAMPAbaH | CAMPSQ6720 | Q6TEK2 | 37256226
MKAVMFIFVMLATICGILAFVPYNPPRPGQSKPFPTFPGHGPFNPKIQWPYPLPNPGH
> CAMPAbaH | CAMPSQ6818 | Q8WSY9 | 17066666
CAAFAYVPLPNVPQPGRRPFPTFPGQGPFNPKI
> CAMPAbaH | CAMPSQ7229 | | 571556170
MAGKKEYEMKVVIFIFALLATICAAFAYVPLPNVPQPGRRPFPTFPGQGPFNPKIKWPQG
Y
> CAMPAbaH | CAMPSQ7230 | | 572299531
MHSCEFLRNRDDIYINATTFIRIETTLCEVCIFDSCKNGKKENEMKVVIFILALLATICV
VFAYVPLPNIPQPARRPFPTFPGQGPFNPKIKWPQNY
2015, © Biomedical Informatics Centre, NIRRH, Mumbai