Abaecin

Abaecin represents antimicrobial peptides produced by bees. These peptides have strong antimicrobial and some anti-fungal activity and has homology to abaecin which is the largest proline-rich antimicrobial peptide isolated from European bumblebee Bombus pascuorum [PMID: 9219367].

The below sequences were used to create Abaecin sequence signatures:

>CAMPSQ923
ELPKLPDDKVLIRSRSNCPKGKVWNGFDCKSPFAFS
>CAMPSQ3775
YVPKIPKPQPNKPNFPSFPGHGPFNPHASRFPRSPKDNGKIVFDAKKEGGKTQWNVETQQ
KVWGNKHGSIHVSAGAGKQPGGKPQGQVGIGGSFSWGK
>CAMPSQ186
YVPLPNVPQPGRRPFPTFPGQGPFNPKIKWPQGY
>CAMPSQ381
FVPYNPPRPGQSKPFPSFPGHGPFNPKIQWPYPLPNPGH
>CAMPSQ3114
FVPYNPPRPYQSKPFPSFPGHGPFNPKIQWPYPLPNPGH

The below sequences were retrieved using Abaecin sequence signatures:

> CAMPAbaH | CAMPSQ186 | P15450 | 1703044
YVPLPNVPQPGRRPFPTFPGQGPFNPKIKWPQGY
> CAMPAbaH | CAMPSQ381 | P81463 | 3912960
FVPYNPPRPGQSKPFPSFPGHGPFNPKIQWPYPLPNPGH
> CAMPAbaH | CAMPSQ923 | Q86SC0 | 74813990
ELPKLPDDKVLIRSRSNCPKGKVWNGFDCKSPFAFS
2015, © Biomedical Informatics Centre, NIRRH, Mumbai