Thaumatin

Thaumatin consists of about 200 residues and contains 8 disulphide bonds. Like other PR proteins, thaumatin is predicted to have a mainly beta structure, with a high content of beta-turns and little helix [PMID: 7049841]. Several stress-induced proteins of plants have been found to be related to thaumatins:A maize alpha-amylase/trypsin inhibitor, two tobacco pathogenesis-related proteins: PR-R major and minor forms,which are induced after infection with viruses, Salt-induced protein NP24 from tomato, Osmotin, a salt-induced protein from tobacco [PMID: 16666857], Osmotin-like proteins OSML13, OSML15 and OSML81 from potato [PMID: 7630973], P21, a leaf protein from soybean, PWIR2, a leaf protein from wheat [PMID: 1650615], Zeamatin, a maize antifunal protein [PMID: 7846159]. This protein is also referred to as pathogenesis-related group 5 (PR5), as many thaumatin-like proteins accumulate in plants in response to infection by a pathogen and possess antifungal activity [PMID: 1463856]. The proteins are involved in systematically acquired resistance and stress response in plants, although their precise role is unknown [PMID: 1463856].

The below sequences were used to create Thaumatin sequence signatures:

>CAMPSQ1113
ATIEVRNNCPYTVWAASTPIGGGRRLNRGQTWVINAPRGTKMARIWGRTGCNFNAAGRGT
CQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKC
HAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYS
YPQDDPTSTFTCPGGSTNYRVVFCPNGVADPNFPLEMPASTDEVAK
>CAMPSQ1118
ANFEIVNNCPYTVWAAASPGGGRRLDRGQT
>CAMPSQ926
ATFTVINKCQYTVWAAAVPAGGGQKLDAGQTWSIXXP
>CAMPSQ1119
ATFNFINNCPFTVWAAAVPG
>CAMPSQ925
ATITVVNRCSYTVWPGALPGGGVRLDPGQRWALNMPAGTAGAAV
>CAMPSQ1120
AKITFTNNHPRTIWP
>CAMPSQ2026
ATITFTNKCTRTVWPGG

The below sequences were retrieved using Thaumatin sequence signatures:

> CAMPThaP, CAMPThaH | CAMPSQ925 | P33044 | 417986
ATITVVNRCSYTVWPGALPGGGVRLDPGQRWALNMPAGTAGAAV
> CAMPThaP, CAMPThaH | CAMPSQ926 | P33045 | 417989
ATFTVINKCQYTVWAAAVPAGGGQKLDAGQTWSIXXP
> CAMPThaP, CAMPThaH | CAMPSQ1113 | P12670 | 6093527
ATIEVRNNCPYTVWAASTPIGGGRRLNRGQTWVINAPRGTKMARIWGRTGCNFNAAGRGT
CQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKC
HAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYS
YPQDDPTSTFTCPGGSTNYRVVFCPNGVADPNFPLEMPASTDEVAK
> CAMPThaP, CAMPThaH | CAMPSQ1118 | P83959 | 68064400
ANFEIVNNCPYTVWAAASPGGGRRLDRGQT
> CAMPThaP, CAMPThaH | CAMPSQ1119 | P83958 | 68064399
ATFNFINNCPFTVWAAAVPG
> CAMPThaP | CAMPSQ1120 | P83957 | 68064398
AKITFTNNHPRTIWP
> CAMPThaP | CAMPSQ1535 | P13867 | 123978
AVFTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCQFDASGRGS
CRTGDCGGVVQCTGYGRAPNTLAEYALKQFNNLDFFDISILDGFNVPYSFLPDGGSGCSR
GPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANNCHPTNYSRYFKGQCPDA
YSYPKDDATSTFTCPAGTNYKVVFCP
> CAMPThaP, CAMPThaH | CAMPSQ1545 | Q01591 | 418127
ATFEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGDGRGS
CQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKC
HAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYS
YPQDDPTSTFTCPSGSTNYRVVFCPNGVTSPNFPLEMPSSDEEAK
> CAMPThaP, CAMPThaH | CAMPSQ1546 | P33679 | 1731426
AAVFTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRG
SCRTGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCS
RGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPD
AYSYPKDDATSTFTCPAGTNYKVVFCP
> CAMPThaH | CAMPSQ1589 | P25871 | 129098
SGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRG
WCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGK
CHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAY
SYPQDDPTSTFTCTSWTTDYKVMFCPYGSAHNETTNFPLEMPTSTHEVAK
> CAMPThaH | CAMPSQ1689 | P25871 |
SGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRG
WCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGK
CHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAY
SYPQDDPTSTFTCTSWTTDYKVMFCPYG
> CAMPThaP, CAMPThaH | CAMPSQ1973 | P81370 | 190358875
ATFNIINNCPFTVWAAAVPGGGKRLDRGQNWIINPGAGTKGARVWPRTGCNFDGAGRGKC
QTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGGCTRGI
KCTADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSGNCGLTNFSKFFKDRCPDAYSYPK
DDQTSTFTCPAGTNYKVVFCP
> CAMPThaP, CAMPThaH | CAMPSQ2026 | P84334 | 57013024
ATITFTNKCTRTVWPGG
> CAMPThaP, CAMPThaH | CAMPSQ2028 | Q9SMH2 | 25091419
AKITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAPWKGRFWARTRCTTN
SGKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATR
GGTGDCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCP
ATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP
2015, © Biomedical Informatics Centre, NIRRH, Mumbai