Penaeidin

Penaeidins are unique family of antimicrobial peptides which were initially identified in the hemolymph of the Pacific white shrimp, Penaeus vannamei. These peptides contain an N-terminal termianl proline-rich and a C- terminal cysteine-rich domains [PMID: 12242595].

The below sequences were used to create Penaeidin sequence signatures:

>CAMPSQ732
HSSGYTRPLRKPSRPIFIRPIGCDVCYGIPSSTARLCCFRYGDCCHL
>CAMPSQ617
QGYKSGHTGPYPRPLYGSRPIGLRPITRPDPSCAGCRILTLDDAIACCRRLGRCCSALKG
>CAMPSQ4012
MRLVVCLVFVASFALVCRGQGYKSGHTGPYPRPLYGSRPIGLRPITRPDPSCAGCRIITL
DDAIACCRRLGRCCSALKG
>CAMPSQ344
QVYKGGYTRPIPRPPPFVRPLPGGPIGPYNGCPVSCRGISFSQARSCCSRLGRCCHVGKG
YS
>CAMPSQ342
YRGGYTGPIPRPPPIGRPPLRLVVCACYRLS
>CAMPSQ343
YRGGYTGPIPRPPPIGRPPFRPVCNACYRLSVSDARNCCIKFGSCCHLVK

The below sequences were retrieved using Penaeidin sequence signatures:

> CAMPPenP, CAMPPenH | CAMPSQ342 | P81056 | 3024355
YRGGYTGPIPRPPPIGRPPLRLVVCACYRLS
> CAMPPenP | CAMPSQ343 | P81057 | 3024356
YRGGYTGPIPRPPPIGRPPFRPVCNACYRLSVSDARNCCIKFGSCCHLVK
> CAMPPenP, CAMPPenH | CAMPSQ344 | P81058 | 3024416
QVYKGGYTRPIPRPPPFVRPLPGGPIGPYNGCPVSCRGISFSQARSCCSRLGRCCHVGKG
YS
> CAMPPenH | CAMPSQ617 | Q3Y683 | 73671197
QGYKSGHTGPYPRPLYGSRPIGLRPITRPDPSCAGCRILTLDDAIACCRRLGRCCSALKG
> CAMPPenP, CAMPPenH | CAMPSQ732 | Q962A7 | 157881028
HSSGYTRPLRKPSRPIFIRPIGCDVCYGIPSSTARLCCFRYGDCCHL
> CAMPPenP, CAMPPenH | CAMPSQ1238 | Q963C3 | 25090983
YSSGYTRPLPKPSRPIFIRPIGCDVCYGIPSSTARLCCFRYGDCCHR
> CAMPPenH | CAMPSQ1239 | Q962B1 | 25090979
QGCKGPYTRPILRPYVRPVVSYNACTLSCRGITTTQARSCCTRLGRCCHVAKGYS
> CAMPPenH | CAMPSQ1240 | Q962B0 | 25090978
QGYKGPYTRPILRPYVRPVVSYNACTLSCRGITTTQARSCSTRLGRCCHVAKGYS
> CAMPPenP, CAMPPenH | CAMPSQ1287 | P81059 | 3024417
QVYKGGYTRPVPRPPPFVRPLPGGPIGPYNGCPVSCRGISFSQARSCCSRLGRCCHVGKG
YS
> CAMPPenH | CAMPSQ1288 | P81060 | 3024418
QVYKGGYTRPIPRPPFVRPVPGGPIGPYNGCPVSCRGISFSQARSCCSRLGRCCHVGKGY
S
> CAMPPenH | CAMPSQ1318 | A1IKN6 | 119852243
RLPPGFTPWRIAPAIV
> CAMPPenH | CAMPSQ1343 | Q963D9 | 14719123
MRLVVCLVFLASFALVCQGQVYKGGYTRPVPRPPFVRPLPGGPIGPYNGCPVSCRGISFS
QARSCCSRLGRCCHVGKG
> CAMPPenP | CAMPSQ1487 | Q95NT0 | 25090972
HSSGYTRPLPKPSRPIFIRPIGCDVCYGIPSSTARLCCFRYGDCCHR
> CAMPPenH | CAMPSQ1964 | Q963D9 | 25090996
QVYKGGYTRPVPRPPFVRPLPGGPIGPYNGCPVSCRGISFSQARSCCSRLGRCCHVGKGY
S
> CAMPPenP, CAMPPenH | CAMPSQ1965 | Q963D0 | 25090995
QVYKGGYTRPIPRPPPFVRPLPGGPIGPYNGCPISCRGISFSQARSCCSRLGRCCHVGKG
YS
> CAMPPenH | CAMPSQ1966 | Q963C7 | 25090988
QVYKGGYTRPIPRPPPFVRPLPGGPISPYNGCPVSCRGISFSQARSCCSRLGRCCHVGKG
YS
> CAMPPenP, CAMPPenH | CAMPSQ1967 | Q963C6 | 25090986
QVYKGGYTRPIPRPPPFVRPLPGGPIGPYNGCPISCRGISFSQARSYCSRLGRCCHVGKG
YS
> CAMPPenP, CAMPPenH | CAMPSQ1968 | Q963C5 | 25090985
QVYKGGYTRPIPRPPPFVRPLPGGPIGPYNGRPVSCRGISFSQARSCCSRLGRCCHVGKG
YS
> CAMPPenH | CAMPSQ1969 | Q962B2 | 25090981
QGYKGPYTRPILRPYVRPVVSYNACTLSCRGITTTQARSCCTRLGRCCHVAKGYS
> CAMPPenH | CAMPSQ1970 | Q962A9 | 25090976
QRGGFTGPIPRPPPHGRPPLGPICNACYRLSFSDVRICCNFLGKCCHLVK
> CAMPPenH | CAMPSQ1971 | Q962A8 | 25090975
QGYKGPYTRPILRPYVRPVVSYNVCTLSCRGITTTQARSCCTRLGRCCHVAKGYS
> CAMPPenP, CAMPPenH | CAMPSQ1972 | Q963C4 | 25090919
YRGGYTGPIPRPPPIGRPPLRPVCNACYRLSVSDARNCCIKFGSCCHLVK
> CAMPPenH | CAMPSQ2375 | D9J162 | 299780318
VTGCSSCRLITFNYAVACCWRLGRCCSAER
> CAMPPenH | CAMPSQ2699 | E2IH91 | 307335640
RLVVCLVSLASFALVCRAQGYQGGYTRPFPRPPYGGGGYHPVPGCTSCHRLSPLQARAAC
CRQLGRCCDARK
> CAMPPenP, CAMPPenH | CAMPSQ2769 | P81056 |
YRGGYTGPIPRPPPIGRPPLRLVVCACYRLSVSDARNCCIKFGSCCHLVK
> CAMPPenH | CAMPSQ4012 | Q3Y6N7 |
MRLVVCLVFVASFALVCRGQGYKSGHTGPYPRPLYGSRPIGLRPITRPDPSCAGCRIITL
DDAIACCRRLGRCCSALKG
> CAMPPenH | CAMPSQ4217 | K7W919 | 414081427
MRLVVCLVFLASFALVCQGYKGTYTRPFSRPTGTRPFSPSVTGCSSCHLINFNDAVACCW
RLGRCCSAVKG
> CAMPPenH | CAMPSQ4643 | A0AEI1 | 116812782
MLTLKKSLLLLFFFGTISLSLCEQERDADEDENESRTVRVPPGFTPFRIAPASSLKRNAD
ADETERRISKRPPGFSPFRIAPASSLKRNADADETERRISKRPPGFSPFRIAPASSLKRN
ADADETERRISKRPPGFSPFRIAPASSLKRNADEDENESRMVRVPPGFSPFRIAPEIV
> CAMPPenH | CAMPSQ4644 | A0AEI2 | 116812784
MLTLKKSLLLLFFFGTISLSLCEQERDADEDENESRTVRVPPGFTPFRIAPASSLKRNAD
ADETERRISKRPPGFSPFRIAPASSLKRNADADETERRISKRPPGFSPFRIAPASSLKRN
ADADETERRISKRPPGFSPFRIAPASSLKRNADADETERRISKRPPGFSPFRIAPASSLK
RNADEDENESRMVRVPPGFSPFRIAPEIV
> CAMPPenH | CAMPSQ4645 | A0AEI3 | 116812786
MLTLKKSLLLLFFFGTISLSLCEQERDADEDENESRTVRVPPGFTPFRIAPASSLKRNAD
ADETERRISKRPPGFSPFRIAPASSLRRNADEDENESRMVRVPPGFSPFRIAPASSLKRN
ADADETERRISKRPPGFSPFRIAPASSLKRNADADETERRISKRPPGFSPFRIAPASSLK
RNADEDENESRMVRVPPGFSPFRIAPEIV
> CAMPPenH | CAMPSQ4646 | A0AEI4 | 116812788
MLTLKKSLLLLFFFGTISLSLCEQERDADEDENEQEAKVEDVKRAGYSRMIRRPPGFTPF
RIAPASSVKRNADEDENESRMIRRPPGFSPFRIAPASSVKRNADEDENESRMIRRPPGFS
PFRIAPASSVKRNADEDENESRMIRRPPGFSPFRIAPASSVKRNADEDENESRVARVPPG
FTPFRIAPEIV
> CAMPPenH | CAMPSQ4651 | A0SE30 | 83638461
MRLVVCLVFLASFALVCQGQKSGYTRPISRPPYGGGYGNVCTSCHVLTTSQARSCCSRFG
RCCVPRRGYSG
> CAMPPenH | CAMPSQ4679 | A4UMS2 | 143598606
MRLVVCLVFLASFALVCQGHGYKSGYTRPFSRPPFGGIYRPVRPVCNACYRLSYSDALNC
CTRFGSCCHIRKG
> CAMPPenH | CAMPSQ4680 | A4UMS5 | 143598723
MRLVVCLVFLASFALVCQGHRGGYTRPFPRPPYGLQYRPVRPACNACYRLSYSAALNCCT
KFGSCCHIRKG
> CAMPPenH | CAMPSQ4689 | A5PG36 | 148771417
MFTLKKSLLLLFFLGTISLSLCEQERDADEDEYAGDAKAEDVKRAGYSRVISLPAGLSPL
RIAPASSRMIRRPPGFSPFRIAPASTLKRDADEDEYAGEAKAEDVKRAGYSRVISLPAGL
SPFRIAPASTLKRDADEDEYAGEAKAEDVKRAGYARVISLPAGLSPLRIAPASTLKRDAD
EDEYAGEAKAEDVKRAGYARVISLPAGLSPLRIAPASTLKRDADEDEYAGEAKAEDVKRA
RYSRENSLPAGLSPL
> CAMPPenH | CAMPSQ4690 | A5PG37 | 148771419
MFTLKKSLLLLFFLGTISLSLCEQERDADEDEYAGDAKAEDVKRAGYSRVISLPAGLSPL
RIAPASSRMIRRPPGFSPFRIAPASTLKRDADEDEYAGEAKAEDVKRAGYSRVISLPAGL
SPFRIAPASTLKRDADEDEYAGEAKAEDVKRAGYARVISLPAGLSPLRIAPASTLKRDAD
EDEYAGEAKAEDVKRAGIRRPPGFSPLRIAPASSRMIRRPPGFSPFRIAPAIV
> CAMPPenH | CAMPSQ4691 | A5PG38 | 148771421
MFTLKKSLLLLFFLGTISLSLCEQERDADEDEYAGDAKAEDVKRAGYSRVISLPAGLSPL
RIAPASSRMIRRPPGFSPFRIAPASTLKRDADEDEYAGEAKAEDVKRAGYSRVISLPAGL
SPFRIAPASTLKRDADEDEYAGEAKAEDVKRAGIRRPPGFSPLRIAPASSRMIRRPPGFS
PFRIAPAIV
> CAMPPenH | CAMPSQ4937 | B0FLD4 | 164451885
MRLVVCLVFLASFALVCQGQVYKGGYTRPVPRPPPFVRPVPGGPIGPYNGCPVSCRGISF
SQARSCCSRLGRCCHVGKGYSG
> CAMPPenH | CAMPSQ4938 | B0FLD5 | 164451887
MRLVVCLVFLASFALVCQGQVYKGGYTRPIPRPPPFVRPLPGGPIGPYNGCLVSCRGISF
SQARSCCSRLGRCCHVGKGYSG
> CAMPPenH | CAMPSQ4971 | B2FUW2 | 186167270
MFTLKKSLLLLFFLGTISLSLCEQERDADEDEYAGDAKAEDVKRAGYSRVISLPAGLSPL
RIAPASSRMIRRPPGFSPFRIAPASTLKRDADEDEYAGEAKAEDVKRAGIRRPPGFSPLR
IAPASSRMIRRPPGFSPFRIAPAIV
> CAMPPenH | CAMPSQ4973 | B2G280 | 186167278
MFTLKKSLLLLFFLGTINLSLCEQERDADEDENEREAKVEDVKRAGYSRMIRRPPGFSPF
RIAPASSLKRDADEDEDAGEAKTEDVKRAGYSRMIRRPPGFTPFRIAPASTLKRDRDEDE
YAGQAKAEDVKRAGYSRMIRVPPGFTPFRIAPASTLKRDADEDEYAGEAKAEDVKRAGYS
RMIRRPPGFSPFRIAPASTLKRDADEDEYAGEAKVEDVKRAGYSRMIRRPPGFSPFRIAP
ASTLKRDSDEDEYAG
> CAMPPenH | CAMPSQ5155 | B5LRD2 | 229459073
MRLVVCLVFLVSFALVCQGQGYKGGYTGSYSRPPYGSRPISTRPISRPATGCTSCHTITF
DKAIACCRQFGRCCSALKG
> CAMPPenH | CAMPSQ5256 | B8Y3W2 | 218685685
MRLVVCLVFLASFALVCQGQGYKGPYTRPILRPYVRPVVSYNACPLSCRGITTTQARSCC
TRLGRCCHVAKGYSG
> CAMPPenH | CAMPSQ5257 | B8Y3W3 | 218685687
MRLVVCLVFLASFALVCQSQGYKGPYTRPILRPYVRPFVSYNACPLSCRGITTTQARSCC
TRLGRCCHVAKGYSG
> CAMPPenH | CAMPSQ5542 | C4NYP6 | 434091787
MRLVVCLVFLASFALVCQAQGYQGGYTRPFPRPPYGGGYHPVPVCTSCHRLSPLQARACC
RQLRRCCDAKQTYG
> CAMPPenH | CAMPSQ5579 | C7F445 | 254832580
MRLVVCLVFLASFALVCQAQGYQGGYTRPFPRPPYG
> CAMPPenH | CAMPSQ5678 | D5MTI1 | 295979730
MFTLKKSLLLLFFLGTISLSLCEQERDADEDEYAGEAKAEDVKRAGYSRMIRRPPGFSPF
RIAPASTLKRDADEDEYAGEAKAEDVKRAGYSRMIRRPPGFTPFRIAPAIV
> CAMPPenH | CAMPSQ5679 | D5MTI2 | 295979732
MFTLKKSLLLLFFLGTISLSLCEQERDADEDEYAGEAKAEDVKRAGYSRMIRRPPGFSPF
RIAPASTLKRDADEDEYAGEAKAEDVKRAGYSRMIRRPPGFSPFRIAPASTLKRDADEDE
YAGEAKAEDVKRAGYSRMIRRPPGFTPFRIAPAIV
> CAMPPenH | CAMPSQ5680 | D5MTI3 | 295979734
MFTLKKSLLLLFFLGTISLSLCEQERDADEDEYAGEAKAEDVKRAGYSRMIRRPPGFSPF
RIAPASTLKRDADEDEYAGEAKAEDVKRAGYSRMIRRPPGFSPFRIAPASTLKRDADEDE
YAGEAKAEDVKRAGYSRMIRRPPGFSPFRIAPASTLKRDADEDEYAGEAKAEDVKRAGYS
RMIRRPPGFTPFRIAPAIV
> CAMPPenH | CAMPSQ5731 | E2IH92 | 307335642
MRLVVCLVYLVSFALVCQGQGFKGGYTGSYSRAPPYGSRGPISTHPISRPATGCTSCHTI
TFDKAACCRLFGRCCSALKG
> CAMPPenH | CAMPSQ5763 | E5D2J6 | 308051809
MFTLKKSLLLLFFLGTINLSLCKQERDADEDENEREAKVEDVKRAGYSRMIRRPPGFSPF
RVAPASSLKRDADEDENEQDAKVEDVKRAGYTRMIRRPPGFTPFRIAPAIV
> CAMPPenH | CAMPSQ5764 | E5D2J7 | 308051811
MFTMKKSLLLLFFLGTINLSLCKQERDAEEDENEREAKVEDVKRAGYSRMIRRPPGFSPF
RVVPASSLKRDADEDENEREAKVEDVKRAGYSRMIRRPPGFSPFRVAPASSLKRDADEEE
NEREAKVEDVKRAGYSRMIRRPPGFSPFRVAPASSLKRDADEDENEQDAKVEDVKRAGYT
RMIRRPPGFTPFRIAPAIV
> CAMPPenH | CAMPSQ5765 | E5D2J8 | 308051813
MFTMKKSLLLLFFLGTINLSLCKQERDADEDENEREAKVEDVKRAGYSRMIRRPPGFSPF
RVAPASSLKRDADEDENEREAKVEDVKRAGYSRMIRRPPGFSPFRVAPASSLKRDADEDE
NKREAKVEDVKRAGYSRMIRRPPGFSPFRVAPASSLKRDADEDENEREAKVEDVKRAGYA
RMIRRPPGFSPFRVAPASSLKRDADEEENEREVKVEDVKRAGYSRMIRRPPGFSPFRVAP
ASSLKRDADEDENEQ
> CAMPPenH | CAMPSQ6578 | Q3HM08 | 77168460
MRLVVCLVFLASFALVCQGHSSGYTRPLPKPSRPIFIRPIGCDVCYGIPSATARLCCFRY
GDCCHGG
> CAMPPenH | CAMPSQ6579 | Q3HM09 | 77168458
MRLVVCLVFLASFALVCQGQVYKGGYTRPVPRPPFVRPLPGGPIDPYNGCPVSCRGISFS
QARSCCSRLGRCCHVGKGYSG
> CAMPPenH | CAMPSQ6580 | Q3HM10 | 77168456
MRLVVCLVFLASFALVCQGEAYRGGYTGPIPRPPPIGRPPLRPVCNACYRLSVSDARNCC
IRFGSCCHLVKG
> CAMPPenH | CAMPSQ6581 | Q3HNH3 | 76786568
MRLVVCLVFLASFALVCQGQVYKGGYTRPIPRPPPFVRPLPGGPIGPYNGCPVSCRGISF
SQARSCCSRLGRCCHVGKGYSG
> CAMPPenH | CAMPSQ6582 | Q3HNH4 | 76786566
MRLVVCLVFLASFALVCQGHSSGYTRPLPKPSRPIFIRPIGCDVCYGIPSSTARLCCFRY
GDCCHRG
> CAMPPenH | CAMPSQ6583 | Q3HNH5 | 76786564
MRLVVCLVFLASFALVCQGEAYRGGYTGPIPRPPPIGRPPFRPVCNACYRLSVSDARNCC
IKFGSCCHLVKG
> CAMPPenH | CAMPSQ6615 | Q4KXB8 | 56384960
MRLVVCLVFLASFALVCRGQGYKSGHTGPYPRPLYGSRPIGIRPITRPDPSCAGCRILTL
DDAIACCRRLGRCCSALKG
> CAMPPenH | CAMPSQ6620 | Q4U5R1 | 63109228
MRLVVCLVFLASFALVCQGQGYKGGYTGPVVRPFVRPIGRPVVSYNVCPLSCRGITTLQA
RSCCSRLGRCCREAKGYSG
> CAMPPenH | CAMPSQ6626 | Q56H80 | 62002139
MRLVVCLVFLASFAMVCQGHSSGYTRPLPKPSRPIFIRPIGCDVCYGIPSSTARLCCFRY
GDCCHLG
> CAMPPenH | CAMPSQ6627 | Q56H81 | 62002137
MRLVVCLVFLASFALVCQGEAQRGGFTGPIPRPPPHGRPPLGPICNACYRLSFSDVRICC
NFLGKCCHLVKG
> CAMPPenH | CAMPSQ6628 | Q56H82 | 62002135
MRLVVCLVFLASFALVCQGGAHRGGFTGPIPRPPPHGRPPLGPICNACYRLSFSDVRICC
NFLGKCCHLVKG
> CAMPPenH | CAMPSQ6629 | Q56H83 | 62002133
MRLVVCLVFLASFALVCQGHGYKGGYTRPFSRPPFGGIYGPVRPACNACYSISFSDALNC
CTRFGRCCQIRKG
> CAMPPenH | CAMPSQ6630 | Q56H84 | 62002131
MRLVVCLVFLASFALVCQGHGYKGGYTRPFSRPPFGGIYRPVRPACNACYSISFSDALNC
CTRFGRCCQIRKG
> CAMPPenH | CAMPSQ6715 | Q6H2Z5 | 35396284
MRLVVCLVFLASFALVCQAQGYQGGYTRPFPRPPYGGGYHPVPVCTSCHRLSPLQARACC
RQLGRCCDAKQTYG
> CAMPPenH | CAMPSQ6723 | Q6V4W4 | 34148013
MRLVVCLVFLASFALVCQGQGYKGGYTGPVVRPFVRPIGRPFVTPIGRPVVSGNVCPLSC
RGITTLQARSCCSRLGRCCREAKGYSG
> CAMPPenH | CAMPSQ6724 | Q6V4W5 | 34148011
MRLVVCLVFLASFALVCQGEAYRGGYTGPIPRPPPYGRPPLGPVCNHCYRLAFPDARNCC
SRFGRCCHLVKG
> CAMPPenH | CAMPSQ6741 | Q7T2V5 | 31711396
MFTLKKSLLLLFFLGTINLSLCKQERDADEDENEREAKVEDVKRAGYSRMIRRPPGFSPF
RVAPASSLKRDADEDENEREAKVEDVKRAGYARMIRRPPGFSPFRVAPASSLKRDADEDE
NEREAKVEDVKRAGYSRMIRRPPGFSPFRVAPASSLKRGADEDENEREAKVEDVKRAGYS
RMIRRPPGFSPFRVAPASSLKRDADEDENEREAKVEDVKRAGYARMIRRPPGFSPFRVAP
ASSLKRDADEDENER
> CAMPPenH | CAMPSQ6751 | Q7Z286 | 30691690
MRLVVCLVFLASFALVCQGQKGGYTRPISRPPYGGGYGNVCTSCHVLTTSQARSCCSRFG
RCCVPRRGYSG
> CAMPPenP, CAMPPenH | CAMPSQ6836 | Q963C8 | 25090989
MRLVACLVFLASFALVCQGQVYKGGYTRPIPRPPPFVRPLPGGPIGPYNGCPISCRGISF
SQARSCCSRLGRCCHVGKGYSG
> CAMPPenP, CAMPPenH | CAMPSQ6837 | Q963C9 | 25090993
MRLVVCLVFLAPFALVCHGQVYKGGYTRPIPRPPPFVRPLPGGPIGPYNGCPVSCRGISF
SQARSCCSRLGRCCHVGKGYSG
2015, © Biomedical Informatics Centre, NIRRH, Mumbai