Hepcidin

Hepcidin is a antibacterial and anti-fungal protein expressed in the liver and is also a signalling molecule in iron metabolism. The hepcidin protein is cysteine-rich and forms a distorted beta-sheet with an unusual disulphide bond found at the turn of the hairpin [PMID: 12138110].

The below sequences were used to create Hepcidin sequence signatures:

>CAMPSQ3812
APAKCTPYCYPTRDGVFCGVRCDFQHHHHHH
>CAMPSQ3428
MKTFSVAVAVAIVLAFICTQESSALPVTGVEELVELVSSDDPVADHQELPVELGERLFNI
RKKRASPKCTPYCYPTRDGVFCGVRCDF
>CAMPSQ3429
MKTFSVAVAVAVVLAFICTQESSALPVTGIEELVEPVSSDNNDNHQGLPVELRERLVNIR
KKRAPTDCIPYCYPTGDGFHCGVTCRF
>CAMPSQ2897
QSHLSLCRWCCNCCRSNKGC
>CAMPSQ240
GCRFCCNCCPNMSGCGVCCRF
>CAMPSQ1098
RCRFCCRCCPRMRGCGICCRF
>CAMPSQ2895
CRFCCRCCPRMRGCGLCCRF
>CAMPSQ2896
GIKCRFCCGCCTPGICGVCCRF
>CAMPSQ4289
MKVLAACVFLLLLVLLHGSPAACSALRAQANIGLMPRPETGAQSHGLEAAAGLMPHPEIG
AQSLEVPLRRSKRFNSHFPICSYCCNCCRNKGCGLCCRT
>CAMPSQ4
ICIFCCGCCHRSKCGMCCKT
>CAMPSQ983
DTHFPICIFCCGCCHRSKCGMCCKT

The below sequences were retrieved using Hepcidin sequence signatures:

> CAMPHepH | CAMPSQ4 | P81172 | 10863973
ICIFCCGCCHRSKCGMCCKT
> CAMPHepH | CAMPSQ240 | P82951 | 21542075
GCRFCCNCCPNMSGCGVCCRF
> CAMPHepH | CAMPSQ983 | P81172 | 159162673
DTHFPICIFCCGCCHRSKCGMCCKT
> CAMPHepH | CAMPSQ1098 | A1Z0M0 | 223635234
RCRFCCRCCPRMRGCGICCRF
> CAMPHepH | CAMPSQ1340 | Q6QDC3 | 45154846
DCRFCCGCCTDVSGCGVCCRF
> CAMPHepH | CAMPSQ1386 | Q3YMZ8 | 66969191
MRPMSIACAVAVIIACVCALQSAALPSEVRLDPEVRLEEPEDSEAARSIDQGVAAALAKE
TSPEVLFRTKRQSHLSLCRYCCNCCKNKGCGFCCRF
> CAMPHepH | CAMPSQ1433 | Q66NI7 | 51854820
MKTFSVAVAVAVVLTFICLQESSAVSFTEVQELEEPMSNGSPVAAYEEMSEESWKMPYAS
RRWRCRFCCRCCPRMRGCGLCCQRR
> CAMPHepH | CAMPSQ1456 | Q49S92 | 51095241
PHQTGQLTDLRAQDTAGAEAGLQPTLQLRRLRRRDTHFPICIFCCGCCKTPKCGLCCIT
> CAMPHepH | CAMPSQ1464 | Q5U9D2 | 58761191
PHQTGQLTDLRAQDTAGAEAGLQPTLQLRRLRRRDTHFPICIFCCGCCKTPKCGFCCKT
> CAMPHepH | CAMPSQ1533 | Q9EQ21 | 21542093
DTNFPICIFCCKCCNNSQCGICCKT
> CAMPHepH | CAMPSQ1534 | Q8MJ80 | 47605566
DTHFPICIFCCGCCRKAICGMCCKT
> CAMPHepH | CAMPSQ1666 | Q5M9M1 | 56541090
QMRQTTELQPLHGEESRADIAIPMQKRRKRDINFPICRFCCQCCNKPSCGICCE
> CAMPHepH | CAMPSQ1667 | Q2NKT0 | 84201661
PPQTRQLTDLQTKDTAGAAAGLTPVLQRRRRDTHFPICIFCCGCCRKGTCGMCCRT
> CAMPHepH | CAMPSQ1668 | A7XEH6 | 156530229
DTHFPICIFCCGCCHRSKCGMCCKT
> CAMPHepH | CAMPSQ1669 | A7XEH7 | 156530231
DTHFPICIFCCGCCHRSKCGMCCKT
> CAMPHepH | CAMPSQ1670 | A7XEH8 | 156530233
DTHFPICIFCCGCCHRSKCGMCCRT
> CAMPHepH | CAMPSQ1671 | A7XEH9 | 156530235
DTHFPICIFCCGCCHRSKCGMCCRT
> CAMPHepH | CAMPSQ1672 | A7XEI0 | 156530237
DTHFPICIFCCGCCHRSKCGMCCRT
> CAMPHepH | CAMPSQ1673 | A7XEI1 | 156530239
DTHFPICIFCCGCCHRSKCGMCCRT
> CAMPHepH | CAMPSQ1674 | A7XEI2 | 156530241
DTHFPICIFCCGCCHRSKCGMCCRT
> CAMPHepH | CAMPSQ1675 | A7XEI3 | 156530243
DTHFPICIFCCGCCHRSKCGMCCRT
> CAMPHepH | CAMPSQ1676 | A7XEI4 | 156530245
DTHFPICIFCCGCCHRSKCGMCCKT
> CAMPHepH | CAMPSQ1677 | A7XEI5 | 156530247
DTHFPICIFCCGCCRQSNCGMCCKT
> CAMPHepH | CAMPSQ1678 | A7XEI6 | 156530249
DTHFPICIFCCGCCHRSKCGMCCRT
> CAMPHepH | CAMPSQ1679 | A7XEI7 | 156530251
DTHFPICIFCCGCCRQPNCGMCCKT
> CAMPHepH | CAMPSQ1680 | A7XEI8 | 156530253
DTHFPICIFCCGCCHRSKCGMCCKT
> CAMPHepH | CAMPSQ1681 | A7XEI9 | 156530255
DTHFPICIFCCGCCHRSKCGMCCKT
> CAMPHepH, CAMPHepH | CAMPSQ1682 | Q7T273 | 45387595
LCRFCCKCCRNKGCGYCCKF
> CAMPHepH | CAMPSQ1684 | Q5U9D2 | 62900176
PHQTGQLTDLRAQDTAGAEAGLQPTLQLRRLRRRDTHFPICIFCCGCCKTPKCGLCCKT
> CAMPHepH, CAMPHepH | CAMPSQ1685 | Q7T273, P61516 | 143811401, 47605599
QSHLSLCRFCCKCCRNKGCGYCCKF
> CAMPHepH | CAMPSQ1686 | Q99MH3 | 21542070
DTNFPICLFCCKCCKNSSCGLCCIT
> CAMPHepH | CAMPSQ1687 | Q9DFD6 | 21542090
XSHLSLCRWCCNCCHNKGXGFCCKF
> CAMPHepH | CAMPSQ1813 | Q801Y3 | 47605662
QIHLSLCGLCCNCCHNIGCGFCCKF
> CAMPHepH | CAMPSQ1899 | Q5NVR8 | 75040808
DTHFPIYIFCCGCCHRSKCGMCCKT
> CAMPHepH | CAMPSQ1901 | Q80T19 | 47605663
DINFPICRFCCQCCNKPSCGICCEE
> CAMPHepH | CAMPSQ2170 | D1KKA2 | 270047475
MALNTNIRAACLLLLLLASLTSGSVLPHQTRQLADLQTQDAAGMAGAAAGLMPGLHQLRR
RDTHFPICTLCCGCCNKQKCGWCCKT
> CAMPHepH | CAMPSQ2350 | I6ZVM5 | 395805486
LEEAGSNDTPVAAHQEMSTESWMMPNHIRQKRQSHISLCRY
2015, © Biomedical Informatics Centre, NIRRH, Mumbai